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SIMS tutorial

AIMS tutorial

GWA tutorial

SAIL tutorial

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The usage of all SIMBioMS software is governed by the following license.

 


Download SIMS


Installation

For SIMS the following installations are available:

  • Light Installation
  1. Download and install the latest version of Apache Tomcat suitable for your OS (click here for Windows Installer). This will also require installation of Java (click here for Windows Installer).
  2. Choose appropriate SIMS configuration, download light installation and deploy it on Tomcat (How to deploy ?)
SIMS Configuration Light Installation
SIMS for Type 2 Diabetes
SIMS_T2D.war
SIMS for Metabolic Syndrome SIMS_MS.war
SIMS for Autoimmune Disease
SIMS_AD.war


  • Full Installation
  1. Download and install the latest version of Apache Tomcat (minimal requirement is Tomcat 6.0) suitable for your OS. This will also require installation of JRE compatible with Tomcat version.
  2. Download and install the PostgreSQL version 8.3.
  3. SIMS full installations consist of Tomcat deployments (to use them generally it should be sufficient to copy the provided directory and its files in directory "$CATALINA_HOME/webapps" and make the necessary configurations in files "SIMS/WEB-INF/web.xml", "SIMS/WEB-INF/classes/hibernate.properties") and database scripts. To download Tomcat deployments and database scripts click here.

Sources

Since SIMBioMS is open source project source files can be downloaded and changed by user if needed.

 


Download AIMS


Installation

For AIMS the following installations are available:

  • Light Installation
  1. Download and install the latest version of Apache Tomcat suitable for your OS (click here for Windows Installer). This will also require installation of Java (click here for Windows Installer).
  2. Download light installation AIMS.war and deploy it on Tomcat (How to deploy ?)
  • Full Installation
  1. Download and install the latest version of Apache Tomcat (minimal requirement is Tomcat 6.0) suitable for your OS. This will also require installation of JRE compatible with Tomcat version.
  2. Download and install the PostgreSQL version 8.3.
  3. SIMS and AIMS full installations consist of Tomcat deployments (to use them generally it should be sufficient to copy the provided directory and its files in directory "AIMS/WEB-INF/web.xml", "AIMS/WEB-INF/classes/hibernate.properties" for AIMS) and database scripts. To download Tomcat deployments and database scripts click here.

Sources

Since SIMBioMS is open source project source files can be downloaded and changed by user if needed.


SAIL


Before you install SAIL you need to have installed the latest version of Apache Tomcat and the latest version of MySQL

To install SAIL follow the instructions:

  1. Download the latest stable version of SAIL from here: sail.zip
  2. Unzip the file and move into the new sail folder.
  3. Use the sail_schema.sql file to create the structure of the database
  4. Edit the file sail.xml and add the location and name of the sail database and the user and password to access it.
  5. Copy sail.xml into your Tomcat config folder. Usually tomcat6/conf/Catalina/localhost/
  6. Copy SAIL.war into the Tomcat webapps directory tomcat6/webapps/

To enable the admin user interface you need to modify the tomcat-users.xml file in tomcat6/conf

Add the following lines (subtitute password for the one you want to use in your installation):

<role rolename="SAILAdmin"/>

<user username="SAILAdmin" password="password" roles="SAILAdmin"/>

Once SAIL has been installed and the admin right set up you need to restart Tomcat

Source code

SAIL source code is available from Sourceforge

 

 

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